GSbench 0.1.0
First release.
- Core (base R):
simulate_population(),qc_markers(),impute_markers(),Gmatrix()(VanRaden), andgblup()(GBLUP by REML, validated againstrrBLUP::mixed.solve). - Unified modelling interface
gs_fit()/predict()covering GBLUP, elastic net (glmnet), random forest (ranger) and gradient boosting (xgboost). -
gs_cv()for breeding-relevant cross-validation (random k-fold and leave-one-group-out). -
gs_ensemble(), a stacked super-learner combining base models with non-negative, out-of-fold-fitted weights. -
gs_benchmark()withprint/summary/plotto compare all available models under one cross-validation.